HMC with single level leapfrog intetgrator. More...

#include <hmc_Leapfrog.h>

Public Member Functions
	HMC_Leapfrog (std::vector< Action * > action, RandomNumbers *rand)
	constructor: with array of actions More...

	HMC_Leapfrog (std::vector< Action * > action, unique_ptr< RandomNumbers > &rand)

	HMC_Leapfrog (std::vector< Action * > action, std::vector< Director * > director, RandomNumbers *rand)
	constructor: with array of actions and directors More...

	HMC_Leapfrog (std::vector< Action * > action, std::vector< Director * > director, unique_ptr< RandomNumbers > &rand)

	HMC_Leapfrog (const ActionList &action_list, RandomNumbers *rand)
	constructor: with action_list More...

	HMC_Leapfrog (const ActionList &action_list, unique_ptr< RandomNumbers > &rand)

	HMC_Leapfrog (const ActionList &action_list, std::vector< Director * > director, RandomNumbers *rand)
	constructor: with action_list and array of directors More...

	HMC_Leapfrog (const ActionList &action_list, std::vector< Director * > director, unique_ptr< RandomNumbers > &rand)

	~HMC_Leapfrog ()
	destructor More...

void	set_parameters (const Parameters &params)

void	set_parameters (double Estep, int Nmdc, int Nprec, int Metropolis_test)

void	set_parameter_verboselevel (const Bridge::VerboseLevel vl)

double	update (Field_G &)

double	langevin (Field_G &iP, Field_G &U)

double	calc_Hamiltonian (Field_G &iP, Field_G &U)

double	calcH_P (Field_G &iP)

void	integrate (Field_G &iP, Field_G &U)

void	update_U (double estep, Field_G &iP, Field_G &U)

void	update_P (double estep, Field_G &iP, Field_G &U)

Static Public Attributes
static const std::string	class_name = "HMC_Leapfrog"

Private Member Functions
	HMC_Leapfrog (const HMC_Leapfrog &)

HMC_Leapfrog &	operator= (const HMC_Leapfrog &)

Private Attributes
int	m_Nmdc

int	m_Nprec

int	m_Metropolis_test

double	m_Estep

Langevin_Momentum *	m_Langevin_P

Staple_lex *	m_staple

std::vector< Action * >	m_action

std::vector< Director * >	m_director

RandomNumbers *	m_rand

Bridge::VerboseLevel	m_vl

Detailed Description

HMC with single level leapfrog intetgrator.

This class implements standartd HMC with simple leapfrog molecular dynamics integrator. While more general integrator is now available, this class is easy to understand and to convenient for first test, and thus kept as it is. 28 Dec 2011 H.Matsufuru YAML is implemented. [03 Mar 2013 Y.Namekawa] Langevin step was moved to separate class. [07 May 2014 H.Matsufuru] unique_ptr is introduced to avoid memory leaks [21 Mar 2015 Y.Namekawa]

Definition at line 44 of file hmc_Leapfrog.h.

Constructor & Destructor Documentation

HMC_Leapfrog::HMC_Leapfrog	(	std::vector< Action * >	action,
		RandomNumbers *	rand
	)

constructor: with array of actions

Definition at line 22 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	std::vector< Action * >	action,
		unique_ptr< RandomNumbers > &	rand
	)

Definition at line 41 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	std::vector< Action * >	action,
		std::vector< Director * >	director,
		RandomNumbers *	rand
	)

constructor: with array of actions and directors

Definition at line 61 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	std::vector< Action * >	action,
		std::vector< Director * >	director,
		unique_ptr< RandomNumbers > &	rand
	)

Definition at line 85 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	const ActionList &	action_list,
		RandomNumbers *	rand
	)

constructor: with action_list

Definition at line 110 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	const ActionList &	action_list,
		unique_ptr< RandomNumbers > &	rand
	)

Definition at line 131 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	const ActionList &	action_list,
		std::vector< Director * >	director,
		RandomNumbers *	rand
	)

constructor: with action_list and array of directors

Definition at line 153 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog	(	const ActionList &	action_list,
		std::vector< Director * >	director,
		unique_ptr< RandomNumbers > &	rand
	)

Definition at line 179 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::~HMC_Leapfrog ( )

destructor

Definition at line 206 of file hmc_Leapfrog.cpp.

HMC_Leapfrog::HMC_Leapfrog ( const HMC_Leapfrog & )

private

Member Function Documentation

double HMC_Leapfrog::calc_Hamiltonian	(	Field_G &	iP,
		Field_G &	U
	)

Definition at line 369 of file hmc_Leapfrog.cpp.

double HMC_Leapfrog::calcH_P ( Field_G & iP )

Definition at line 405 of file hmc_Leapfrog.cpp.

void HMC_Leapfrog::integrate	(	Field_G &	iP,
		Field_G &	U
	)

Definition at line 416 of file hmc_Leapfrog.cpp.

double HMC_Leapfrog::langevin	(	Field_G &	iP,
		Field_G &	U
	)

Definition at line 334 of file hmc_Leapfrog.cpp.

HMC_Leapfrog& HMC_Leapfrog::operator= ( const HMC_Leapfrog & )

private

void HMC_Leapfrog::set_parameter_verboselevel ( const Bridge::VerboseLevel vl )

inline

Definition at line 109 of file hmc_Leapfrog.h.

void HMC_Leapfrog::set_parameters ( const Parameters & params )

Definition at line 214 of file hmc_Leapfrog.cpp.

void HMC_Leapfrog::set_parameters	(	double	Estep,
		int	Nmdc,
		int	Nprec,
		int	Metropolis_test
	)

Definition at line 241 of file hmc_Leapfrog.cpp.

double HMC_Leapfrog::update ( Field_G & Uorg )

Definition at line 263 of file hmc_Leapfrog.cpp.

void HMC_Leapfrog::update_P	(	double	estep,
		Field_G &	iP,
		Field_G &	U
	)

Definition at line 446 of file hmc_Leapfrog.cpp.

void HMC_Leapfrog::update_U	(	double	estep,
		Field_G &	iP,
		Field_G &	U
	)

Definition at line 470 of file hmc_Leapfrog.cpp.

Member Data Documentation

const std::string HMC_Leapfrog::class_name = "HMC_Leapfrog"

static

Definition at line 47 of file hmc_Leapfrog.h.

std::vector<Action *> HMC_Leapfrog::m_action

private

Definition at line 58 of file hmc_Leapfrog.h.

std::vector<Director *> HMC_Leapfrog::m_director

private

Definition at line 59 of file hmc_Leapfrog.h.

double HMC_Leapfrog::m_Estep

private

Definition at line 53 of file hmc_Leapfrog.h.

Langevin_Momentum* HMC_Leapfrog::m_Langevin_P

private

Definition at line 55 of file hmc_Leapfrog.h.

int HMC_Leapfrog::m_Metropolis_test

private

Definition at line 52 of file hmc_Leapfrog.h.

int HMC_Leapfrog::m_Nmdc

private

Definition at line 50 of file hmc_Leapfrog.h.

int HMC_Leapfrog::m_Nprec

private

Definition at line 51 of file hmc_Leapfrog.h.

RandomNumbers* HMC_Leapfrog::m_rand

private

Definition at line 60 of file hmc_Leapfrog.h.

Staple_lex* HMC_Leapfrog::m_staple

private

Definition at line 56 of file hmc_Leapfrog.h.

Bridge::VerboseLevel HMC_Leapfrog::m_vl

private

Definition at line 61 of file hmc_Leapfrog.h.

The documentation for this class was generated from the following files:

src/lib/HMC/hmc_Leapfrog.h
src/lib/HMC/hmc_Leapfrog.cpp

Public Member Functions

Static Public Attributes

Private Member Functions

Private Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation