Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 123]

Bridge
BridgeIO
IO_Format	IO_Format for data layout conversion from/to file
Gauge
ILDG_Format
JLQCD_Format
Format
Trivial_Format
ParameterCheck
SU_N
Mat_SU_N
Vec_SU_N
Test
Test_Eigensolver	Test of eigenvalue solver
Test_Gauge	Test of gauge quantities
Test_GradientFlow	Test of gradientFlow
Test_HMC_Clover	Test of HMC update for clover fermions
Test_HMC_Clover_Isochemical	Test of HMC update for clover fermions with isochemical potential
Test_HMC_Clover_SF	Test of HMC update for clover fermions with SF
Test_HMC_Quenched	Test of quenched HMC update
Test_HMC_Wilson	Test of HMC update for Wilson fermions
Test_HotStart	Test of hot start
Test_IO_Data	Test of I/O
Test_IO_GaugeConfig	Test of I/O
Test_Mult_Clover	Test of Mult with Clover fermion
Test_Mult_Clover_eo	Test of Mult with Clover fermion using even-odd preconditioning
Test_Mult_Wilson	Test of Mult with Wilson fermion
Test_Mult_Wilson_eo	Test of Mult with Wilson fermion using even-odd preconditioning
Test_PolyakovLoop	Measurement of Polyakov loop
Test_QuarkNumSuscept	Quark number susceptibility for the Wilson-type fermion
Test_RandomNumbers_Mseries	Test of random number generator
Test_RandomNumbers_MT19937	Test of random number generator
Test_RandomNumbers_SFMT
Test_Rational	Test of rational approximation of fermion operators
Test_SF_fAfP
Test_ShiftSolver	Test of multishift solver
Test_Spectrum_Clover	Test of spectroscopy with clover fermion
Test_Spectrum_CRSMatrix	Test of CRS matrix format
Test_Spectrum_Wilson	Test of Wilson fermion solver
Test_TopologicalCharge	Test of Topological Charge measurement
Test_WilsonLoop	Test of Wilson loop measurement
yy
parser	A Bison parser
semantic_type	Symbol semantic values
token	Tokens
location	Abstract a location
position	Abstract a position
stack
slice	Present a slice of the top of a stack
Action	Base class of HMC action class family
Action_F_Ratio	HMC action for Hasenbusch preconditioned fermions
Action_F_Ratio_eo	HMC action for Hasenbusch preconditioned fermions
Action_F_Ratio_lex	HMC action for Hasenbusch preconditioned fermions
Action_F_Rational
Action_F_Rational_frame
Action_F_Rational_frame_SF
Action_F_Standard	Standard fermion action for HMC
Action_F_Standard_eo	Standard even-odd preconditioned fermion action for HMC
Action_F_Standard_lex	Standard fermion action for HMC
Action_F_Standard_SF	Standard fermion action with SF BC for HMC
Action_G_Plaq
Action_G_Plaq_SF	HMC action class for plaquette gauge action with SF BC
Action_G_Rectangle
Action_G_Rectangle_SF
Builder_Integrator
Channel	Channel class for asynchronous communication
bgnet_IDs
ChannelSet	ChannelSet class for a collection of channels
CommonParameters	Common parameter class: provides parameters as singleton
Communicator	Communication library which wraps MPI
Base	Base case
Communicator_impl	Implementation of Communicator with BGNET library
Base	Base class
Layout	Layout class for logical organisation of parallel nodes
Corr2pt_4spinor	Two-point correlator for Wilson-type fermions
Corr2pt_Wilson_SF	Two-point correlator for Wilson-type fermions with SF BC
Counter	Counter of time and GFlops for Blue Gene/Q at KEK
DataIO	DataIO class for file I/O of general collection of data
DataIO_Text	DataIO_Text class for general file I/O in plain Text format
Decompose_Hessenberg_Cmplx
Decompose_LU_Cmplx
Decompose_LUP_Cmplx
Decompose_QR_Cmplx
Director	Manager of commonly used data object in HMC
Director_Smear	Manager of smeared configurations
Eigen_QR_Cmplx
Eigensolver	Eigensolver class for abstract base class of eigen solvers
Eigensolver_IRLanczos	Eigenvalue solver with Implicitly Restarted Lanczos algorithm
EvalExpr	EvalExpr class for algebraic expression in parameter strings
FactoryTemplate
Field	Container of Field-type object
Field_F	Wilson-type fermion field
Field_F_1spinor	Staggered-type fermion field
Field_F_SF	A class generated to add a function for the SF
Field_G	SU(N) gauge field
Field_G_SF
FieldIO	FieldIO class for file I/O of space-time distributed data
FieldIO_Binary	FieldIO_Binary class for file I/O of Field data in binary format
FieldIO_Binary_Parallel	FieldIO_Binary_Parallel class for file I/O of Field data in binary format using MPI parallel I/O
FieldIO_Fortran	FieldIO_Fortran class for file I/O of Field data in Fortran binary format
FieldIO_LIME	FieldIO_LIME class for file I/O of Field data in LIME format
FieldIO_LIME_MPIIO	FieldIO_LIME_MPIIO class for file I/O of Field data in LIME format
FieldIO_Text	FieldIO_Text class for file I/O of Field data in plain text format
FieldIO_Text_4x4x4x8	FieldIO_Text class for file I/O of Field data in plain text format
FileUtils	File utility
Fopr	Base class of fermion operator family
Fopr_Chebyshev
Fopr_Clover
Fopr_Clover_eo	Even-odd Clover fermion operator
Fopr_Clover_Isochemical
Fopr_Clover_SF
Fopr_CloverTerm
Fopr_CloverTerm_eo
Fopr_CRS	Fermion operator with CRS matrix format
Fopr_eo	Base class of fermion operator family
Fopr_Rational	Fermion operator for rational approximation
Fopr_Rational_SF
Fopr_Smeared	Smeared fermion operator
Fopr_Smeared_eo	Smeared fermion operator with even-odd preconditioning
Fopr_Wilson
Fopr_Wilson_impl	Wilson fermion operator
mult_arg
Fopr_Wilson_eo	Even-odd Wilson fermion operator
Fopr_Wilson_eo_impl	Implementation of even-odd Wilson fermion operator
mult_arg
Fopr_Wilson_Isochemical
Fopr_Wilson_SF	Wilson fermion operator with SF BC
Force	Base class of fermion force calculation
Force_F_Clover_Nf2
Force_F_Clover_Nf2_Isochemical
Force_F_Clover_SF
Force_F_CloverTerm
Force_F_Rational
Force_F_Smeared	Force calculation for smeared fermion operators
Force_F_Wilson_eo
Force_F_Wilson_Nf2
Force_F_Wilson_Nf2_Isochemical
Force_F_Wilson_SF
ForceSmear	Base class for force calculation of smeared operators
ForceSmear_APE
ForceSmear_APE_SF
ForceSmear_HYP
ForceSmear_HYP_SF
Fprop
Fprop_4spinor_lex	Get quark propagator for Fopr with 4-spinor and lexical site index
Fprop_Standard_eo	Get quark propagator for Fopr with even-odd site index
Fprop_Standard_lex	Get quark propagator for Fopr with lexical site index
Fprop_Wilson_Shift
GammaMatrix	Gamma Matrix class
GammaMatrixSet	Set of Gamma Matrices: basis class
GammaMatrixSet_Chiral	Set of Gamma Matrix: chiral representation
GammaMatrixSet_Dirac	Set of Gamma Matrix: Dirac representation
GaugeConfig	GaugeConfig class for file I/O of gauge configuration
GaugeConfig_SF
GaugeFixing	Gauge fixing
GaugeFixing_Coulomb	Coulomb gauge fixing
GaugeFixing_Landau	Landau gauge fixing
GeneratorSet_Mat_SU_N	Set of SU(N) generators
GradientFlow
HMC_General
HMC_Leapfrog
Index_eo	Even-odd site index
Index_lex	Lexical site index
Integrator	Base class of Integrator class family
Integrator_Leapfrog
Integrator_Omelyan
Integrator_UpdateU
Langevin_Momentum	Langevin part of HMC for conjugate momentum to link variable
Math_Rational
Math_Sign_Zolotarev	Determination of Zolotarev coefficients
NoiseVector	Base class for noise vector generator
NoiseVector_Z2	Z2 Noise vector for trance calculation
ParameterManager	Base class of parameter manager
ParameterManager_YAML	Parameter manager with YAML parser
Parameters	Class for parameters
Item
Parameters_Action_F_Rational	Action class for rational HMC
Parameters_Action_F_Rational_frame	Action class for RHMC, with externally constructed Fopr_Rational
Parameters_Action_F_Rational_frame_SF	Action class for RHMC, with externally constructed Fopr_Rational
Parameters_Action_G_Plaq	HMC action class for plaquette gauge action
Parameters_Action_G_Plaq_SF
Parameters_Action_G_Rectangle	HMC action class for rectangular gauge action
Parameters_Action_G_Rectangle_SF	HMC action class for rectangular gauge action with the SF BC
Parameters_Builder_Integrator	Builder of MD integrator for HMC
Parameters_Director_Smear	Parameters class for Director_Smear class
Parameters_Eigensolver_IRLanczos
Parameters_Field_G_SF	SU(N) gauge field class in which a few functions are added for the SF
Parameters_Fopr_Chebyshev	Chebyshev polynomial of fermion operator
Parameters_Fopr_Clover	Clover fermion operator
Parameters_Fopr_Clover_eo
Parameters_Fopr_Clover_Isochemical	Clover fermion operator with isospin chemical potential
Parameters_Fopr_Clover_SF	Clover fermion operator
Parameters_Fopr_CloverTerm	Clover term operator
Parameters_Fopr_CloverTerm_eo	Clover term operator
Parameters_Fopr_Rational
Parameters_Fopr_Rational_SF	Fermion operator for rational approximation
Parameters_Fopr_Wilson	Wilson fermion operator
Parameters_Fopr_Wilson_eo
Parameters_Fopr_Wilson_Isochemical	Wilson fermion operator with isospin chemical potential
Parameters_Fopr_Wilson_SF
Parameters_Force_F_Clover_Nf2	Force calculation for clover quark action
Parameters_Force_F_Clover_Nf2_Isochemical	Force calculation for clover quark action
Parameters_Force_F_Clover_SF	Force calculation for clover quark action with SF BC
Parameters_Force_F_CloverTerm	Force calculation for clover term of clover fermion
Parameters_Force_F_Rational	Force calculation for smeared fermion operators
Parameters_Force_F_Wilson_eo	Force for the Wilson fermion operator with even-odd precondition
Parameters_Force_F_Wilson_Nf2	Force for the standard Wilson fermion operator
Parameters_Force_F_Wilson_Nf2_Isochemical	Force for the Wilson fermion operator with isospin chemical potential
Parameters_Force_F_Wilson_SF	Force for the standard Wilson fermion operator
Parameters_ForceSmear_APE	Recursive calculation for APE smeared fermion force
Parameters_ForceSmear_APE_SF	Recursive calculation for APE smeared fermion force
Parameters_ForceSmear_HYP	Recursive calculation of HYP smeared fermion force
Parameters_ForceSmear_HYP_SF	Recursive calculation of HYP smeared fermion force with SF BC
Parameters_Fprop_Wilson_Shift	Get shifted quark propagators
Parameters_GaugeFixing_Coulomb
Parameters_GaugeFixing_Landau
Parameters_GradientFlow	GradientFlow construction
Parameters_HMC_General	General HMC update class
Parameters_HMC_Leapfrog	HMC with single level leapfrog intetgrator
Parameters_Integrator_Leapfrog	Standard leapfrog integrator to compose MD integrator
Parameters_Integrator_Omelyan	Omelyan integrator to compose MD integrator
Parameters_Integrator_UpdateU	Integrator of link variable for a given conjugate momenta
Parameters_Main
Parameters_Math_Rational	Determionation of coefficients of rational approximation
Parameters_PolyakovLoop	Polyakov loop measurement
Parameters_Projection_Maximum_SU_N	Maximum projection to SU(N) gauge group
Parameters_Projection_Stout_SU3	Stout(exponential)-type projection to SU(N) gauge group
Parameters_Shiftsolver_CG
Parameters_Smear_APE	Parameters class for APE type link smearing
Parameters_Smear_APE_SF	APE type smearing of link variables
Parameters_Smear_APE_spatial	Parameters class for APE_spatial type link smearing
Parameters_Smear_HYP	HYP smearing of link variables
Parameters_Smear_HYP_SF	HYP smearing of link variables with SF BC
Parameters_Solver_BiCGStab
Parameters_Solver_BiCGStab_Cmplx
Parameters_Solver_BiCGStab_DS_L_Cmplx
Parameters_Solver_BiCGStab_IDS_L_Cmplx
Parameters_Solver_BiCGStab_L_Cmplx
Parameters_Solver_CG
Parameters_Solver_CGNE
Parameters_Solver_CGNR
Parameters_Solver_GMRES_m_Cmplx
Parameters_Source_4spinor_Exp	Exponentially smeared source for 4-spinor fermion
Parameters_Source_4spinor_Local	Local source for 4-spinor fermion
Parameters_Source_Exponential
Parameters_Source_Local
Parameters_Source_MomentumWall
Parameters_Source_Wall
Parameters_Source_Wall_SF	Wall source for SF boundary propagator
Parameters_Staples_SF	Staple construction
Parameters_TopologicalCharge	Topological Charge measurement
Parameters_WilsonLoop	Wilson loop measurement
ParametersFactory
PolyakovLoop
Projection	Base class for projection operator into gauge group
Projection_Maximum_SU_N
Projection_Stout_SU3
QuarkNumberSusceptibility_Wilson	Quark number susceptibility for the Wilson-type fermion
RandomNumbers	Base class of random number generators
rand_gauss_even
rand_gauss_odd
rand_uniform
RandomNumbers_Mseries	Random number generator base on M-series
RandomNumbers_MT19937
ShiftField_eo	Methods to shift the even-odd field
ShiftField_lex	Methods to shift a field in the lexical site index
Shiftsolver	Shiftsolver class as an abstract base class for multi-shift solvers
Shiftsolver_CG	Multishift Conjugate Gradient solver
Smear	Base class for smearing of link variables
Smear_APE	APE type smearing of link variables
Smear_APE_SF
Smear_APE_spatial	APE type smearing of spatial link variables
Smear_HYP
Smear_HYP_SF
Solver	Base class for linear solver class family
Solver_BiCGStab	BiCGStab algorithm
Solver_BiCGStab_Cmplx	BiCGStab algorithm with complex variables
Solver_BiCGStab_DS_L_Cmplx	BiCGStab(DS_L) algorithm
Solver_BiCGStab_IDS_L_Cmplx	BiCGStab(IDS_L) algorithm
Solver_BiCGStab_L_Cmplx	BiCGStab(L) algorithm
Solver_CG	Standard Conjugate Gradient solver algorithm
Solver_CGNE	CGNE solver
Solver_CGNR	CGNR solver
Solver_GMRES_m_Cmplx	GMRES(m) algorithm with complex variables
SortField	Base class for sorting pair instances (value,field)
SortField_AbsHigh	Sorting (value,field) in descending order of abs(value)
SortField_AbsLow	Sorting (value,field) in ascending order of abs(value)
Source	Base class of sources for a linear solver
Source_4spinor_Exp
Source_4spinor_Local
Source_Exponential	Exponentially smeared source for 4-spinor fermion
Source_Local	Local source for 4-spinor fermion
Source_MomentumWall	Momentum wall source for 4-spinor fermion
Source_Wall	Wall source for 4-spinor fermion
Source_Wall_SF
Staples	Staple construction
Staples_eo	Staple construction
Staples_SF
SymbolTable
SymbolRecord
TestManager	TestManager class for managing and performing tests
Node
Stat
ThreadManager_OpenMP	Thread manager with OpenMP
Timer
TopologicalCharge
WilsonLoop