This inheritance list is sorted roughly, but not completely, alphabetically:

[detail level 123]

Action	Base class of HMC action class family
Action_F_Ratio_eo	HMC action for Hasenbusch preconditioned fermions
Action_F_Ratio_lex	HMC action for Hasenbusch preconditioned fermions
Action_F_Rational	Action class for RHMC, with externally constructed Fopr_Rational
Action_F_Rational_SF	Action class for RHMC, with externally constructed Fopr_Rational
Action_F_Standard_eo	Standard even-odd preconditioned fermion action for HMC
Action_F_Standard_lex	Standard fermion action for HMC
Action_F_Standard_SF	Standard fermion action with SF BC for HMC
Action_G_Plaq	HMC action class for plaquette gauge action
Action_G_Plaq_SF	HMC action class for plaquette gauge action with SF BC
Action_G_Rectangle	HMC action class for rectangular gauge action
Action_G_Rectangle_SF	HMC action class for rectangular gauge action with the SF BC
ActionList	Lists of actions at respective integrator levels
Communicator_impl::Base
Communicator::Base	Base case
Bridge::BridgeIO
Builder_Integrator	Builder of MD integrator for HMC
Sorter::by_order	Base class for sort ordering
Sorter::by_abs_ascend	Absolute ascending order
Sorter::by_abs_descend	Absolute descending order
Sorter::by_ascend	Ascending order
Sorter::by_descend	Descending order
Channel	Channel class for asynchronous communication
ChannelSet	ChannelSet class for a collection of channels
CommonParameters	Common parameter class: provides parameters as singleton
Communicator	Communication library which wraps MPI
Communicator_impl	MPI-realisation of communicator class implementation
Corr2pt_4spinor	Two-point correlator for Wilson-type fermions
Corr2pt_Wilson_SF	Two-point correlator for Wilson-type fermions with SF BC
Corr4pt_4spinor	Four-point correlator for Wilson-type fermions
DataIO	DataIO class for file I/O of general collection of data
DataIO_Text	DataIO_Text class for general file I/O in plain Text format
GaugeConfig::DataSource
GaugeConfig::DataSource_Random
GaugeConfig::DataSource_Unit
Decompose_Hessenberg_Cmplx
Decompose_LU_Cmplx
Decompose_LUP_Cmplx
Decompose_QR_Cmplx
Director	Manager of commonly used data object in HMC
Director_Smear	Manager of smeared configurations
Eigen_QR_Cmplx
Eigensolver	Eigensolver class for abstract base class of eigen solvers
Eigensolver_IRLanczos	Eigenvalue solver with Implicitly Restarted Lanczos algorithm
EnergyDensity	Energy density measurement
EnergyMomentumTensor	Energy Momentum Tensor measurement
EpsilonTensor	Epsilon tensor utility
EvalExpr	EvalExpr class for algebraic expression in parameter strings
FactoryTemplate< AbstractProduct, ProductCreator >
Field	Container of Field-type object
Field_F	Wilson-type fermion field
Field_G	SU(N) gauge field
Field_G_SF	SU(N) gauge field class in which a few functions are added for the SF
Field_F_SF	A class generated to add a function for the SF
FieldIO	FieldIO class for file I/O of space-time distributed data
FieldIO_Binary	FieldIO_Binary class for file I/O of Field data in binary format
FieldIO_Binary_Parallel	FieldIO_Binary_Parallel class for file I/O of Field data in binary format using MPI parallel I/O
FieldIO_Binary_Distributed	FieldIO_Binary_Distributed class for file I/O of Field data in binary format
FieldIO_Fortran	FieldIO_Fortran class for file I/O of Field data in Fortran binary format
FieldIO_LIME	FieldIO_LIME class for file I/O of Field data in LIME format
FieldIO_LIME_Parallel	FieldIO_LIME_Parallel class for file I/O of Field data in LIME format
FieldIO_None	FieldIO_None class for an analogue of /dev/null
FieldIO_Text	FieldIO_Text class for file I/O of Field data in plain text format
FieldIO_Text_4x4x4x8	FieldIO_Text class for file I/O of Field data in plain text format
FieldStrength	Field strength construction
Filename	Filename utility
Fopr	Base class of fermion operator family
Fopr_Chebyshev	Chebyshev polynomial of fermion operator
Fopr_Clover	Clover fermion operator
Fopr_Clover_Isochemical	Clover fermion operator with isospin chemical potential
Fopr_Clover_SF	Clover fermion operator
Fopr_CloverGeneral	Clover general fermion operator
Fopr_CRS	Fermion operator with CRS matrix format
Fopr_eo	Base class of fermion operator family
Fopr_Clover_eo	Even-odd Clover fermion operator
Fopr_Smeared_eo	Smeared fermion operator with even-odd preconditioning
Imp::Fopr_Wilson_eo
Org::Fopr_Wilson_eo
Fopr_Rational	Fermion operator for rational approximation
Fopr_Rational_SF	Fermion operator for rational approximation
Fopr_Smeared	Smeared fermion operator
Fopr_Wilson_Isochemical	Wilson fermion operator with isospin chemical potential
Fopr_Wilson_SF	Wilson fermion operator with SF BC
Imp::Fopr_CloverTerm
Imp::Fopr_CloverTerm_eo
Imp::Fopr_CloverTerm_General
Imp::Fopr_Wilson
Imp::Fopr_WilsonGeneral
Org::Fopr_CloverTerm
Org::Fopr_CloverTerm_eo
Org::Fopr_CloverTerm_General
Org::Fopr_Wilson
Org::Fopr_WilsonGeneral
Force	Base class of fermion force calculation
Force_F_Clover_Nf2	Force calculation for clover quark action
Force_F_Clover_Nf2_Isochemical	Force calculation for clover quark action
Force_F_Clover_SF	Force calculation for clover quark action with SF BC
Force_F_CloverTerm	Force calculation for clover term of clover fermion
Force_F_Rational	Force calculation for smeared fermion operators
Force_F_Smeared	Force calculation for smeared fermion operators
Force_F_Wilson_eo	Force for the Wilson fermion operator with even-odd precondition
Force_F_Wilson_Nf2	Force for the standard Wilson fermion operator
Force_F_Wilson_Nf2_Isochemical	Force for the Wilson fermion operator with isospin chemical potential
Force_F_Wilson_SF	Force for the standard Wilson fermion operator
Force_G	Base class of gauge force calculation
Force_G_Plaq	HMC force class for plaquette gauge action
Force_G_Plaq_SF	HMC force class for plaquette gauge force with SF BC
Force_G_Rectangle	HMC force class for rectangular gauge action
Force_G_Rectangle_SF	HMC force class for rectangular gauge action with the SF BC
ForceSmear	Base class for force calculation of smeared operators
ForceSmear_APE	Recursive calculation for APE smeared fermion force
ForceSmear_APE_SF	Recursive calculation for APE smeared fermion force
ForceSmear_HYP	Recursive calculation of HYP smeared fermion force
ForceSmear_HYP_SF	Recursive calculation of HYP smeared fermion force with SF BC
IO_Format::Format
IO_Format::Gauge::ILDG_Format
IO_Format::Trivial_Format
IO_Format::Gauge::JLQCD_Format
Fprop	Base class for fermion propagator class family
Fprop_Standard_eo	Get quark propagator for Fopr with even-odd site index
Fprop_Standard_lex	Get quark propagator for Fopr with lexical site index
Fprop_Wilson_Shift	Get shifted quark propagators
GammaMatrix	Gamma Matrix class
GammaMatrixSet	Set of Gamma Matrices: basis class
GammaMatrixSet_Chiral	Set of Gamma Matrix: chiral representation
GammaMatrixSet_Dirac	Set of Gamma Matrix: Dirac representation
GaugeConfig	GaugeConfig class for file I/O of gauge configuration
GaugeConfig_SF
GaugeFixing	Gauge fixing
GaugeFixing_Coulomb	Coulomb gauge fixing
GaugeFixing_Landau	Landau gauge fixing
GaugeFixing_None	None for gauge fixing
GeneratorSet_Mat_SU_N	Set of SU(N) generators
GradientFlow	GradientFlow construction
GradientFlow_RungeKutta	GradientFlow_RungeKutta construction
GradientFlow_AdaptiveRungeKutta	GradientFlow_AdaptiveRungeKutta construction
GradientFlow_RungeKutta_1st	GradientFlow_RungeKutta_1st construction
GradientFlow_RungeKutta_2nd	GradientFlow_RungeKutta_2nd construction
GradientFlow_RungeKutta_3rd	GradientFlow_RungeKutta_3rd construction
GradientFlow_RungeKutta_4th	GradientFlow_RungeKutta_4th construction
HMC_General	General HMC update class
HMC_Leapfrog	HMC with single level leapfrog intetgrator
Index_eo	Even-odd site index
Index_lex	Lexical site index
Integrator	Base class of Integrator class family
Integrator_Leapfrog	Standard leapfrog integrator to compose MD integrator
Integrator_Omelyan	Omelyan integrator to compose MD integrator
Integrator_UpdateP	Integrator of conjugate momenta for given link variables
Integrator_UpdateU	Integrator of link variable for a given conjugate momenta
Langevin_Momentum	Langevin part of HMC for conjugate momentum to link variable
Communicator_impl::Layout	Layout class for logical organisation of parallel nodes
yy::location	Abstract a location
SU_N::Mat_SU_N
Math_Rational	Determionation of coefficients of rational approximation
Imp::Fopr_Wilson_eo::mult_arg
Imp::Fopr_Wilson::mult_arg
Imp::Fopr_WilsonGeneral::mult_arg
TestManager::Node
NoiseVector	Base class for noise vector generator
NoiseVector_Z2	Z2 Noise vector for a trace calculation
ParameterManager	Base class of parameter manager
ParameterManager_YAML	Parameter manager with YAML parser
Parameters	Class for parameters
yy::parser	A Bison parser
Parser_bridge
PolyakovLoop	Polyakov loop measurement
yy::position	Abstract a position
Projection	Base class for projection operator into gauge group
Projection_Maximum_SU_N	Maximum projection to SU(N) gauge group
Projection_Stout_SU3	Stout(exponential)-type projection to SU(N) gauge group
Sorter::proxy	Proxy object to pass to stl sort algorithm
QuarkNumberSusceptibility_Wilson	Quark number susceptibility for the Wilson-type fermion
RandomNumbers::rand_gauss_even
RandomNumbers::rand_gauss_odd
RandomNumbers::rand_uniform
RandomNumberManager	Manager class for RandomNumbers
RandomNumbers	Base class of random number generators
RandomNumbers_Mseries	Random number generator base on M-series
RandomNumbers_MT19937
yy::parser::semantic_type	Symbol semantic values
ShiftField_eo	Methods to shift the even-odd field
ShiftField_lex	Methods to shift a field in the lexical site index
Shiftsolver	Shiftsolver class as an abstract base class for multi-shift solvers
Shiftsolver_CG	Multishift Conjugate Gradient solver
yy::slice< T, S >	Present a slice of the top of a stack
Smear	Base class for smearing of link variables
Smear_APE	APE type smearing of link variables
Smear_APE_SF	APE type smearing of link variables
Smear_APE_spatial	APE type smearing of spatial link variables
Smear_HYP	HYP smearing of link variables
Smear_HYP_SF	HYP smearing of link variables with SF BC
Solver	Base class for linear solver class family
Solver_BiCGStab_Cmplx	BiCGStab algorithm with complex variables
Solver_BiCGStab_DS_L_Cmplx	BiCGStab(DS_L) algorithm
Solver_BiCGStab_IDS_L_Cmplx	BiCGStab(IDS_L) algorithm
Solver_BiCGStab_L_Cmplx	BiCGStab(L) algorithm
Solver_CG	Standard Conjugate Gradient solver algorithm
Solver_CGNE	CGNE solver
Solver_CGNR	CGNR solver
Solver_GMRES_m_Cmplx	GMRES(m) algorithm with complex variables
Sorter
Source	Base class of source for a linear solver
Source_Exponential	Exponentially smeared source for 4-spinor fermion
Source_Local	Local source for 4-spinor fermion
Source_MomentumWall	Momentum wall source for 4-spinor fermion
Source_Random	Random noise source in the space at a given timeslice
Source_Wall	Wall source for 4-spinor fermion
Source_Wall_SF	Wall source for SF boundary propagator
yy::stack< T, S >
yy::stack< location_type >
yy::stack< semantic_type >
yy::stack< state_type >
Staple	Base class for Staple construction
Staple_eo	Staple construction
Staple_lex	Staple construction
Staple_SF	Staple construction
TestManager::Stat
SymbolTable::SymbolRecord
SymbolTable
TestManager	TestManager class for managing and performing tests
ThreadManager_OpenMP	Thread manager with OpenMP
Timer
yy::parser::token	Tokens
TopologicalCharge	Topological Charge measurement
Bridge::unique_ptr< T >
Bridge::unique_ptr< T[]>
SU_N::Vec_SU_N
WilsonLoop	Wilson loop measurement