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test_Spectrum_Clover_2ptFunction_withFieldIO.cpp
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1 
14 #include "test.h"
15 
16 #include <sstream>
17 
18 #include "gaugeConfig.h"
19 #include "staples.h"
20 
21 #include "randomNumbers_Mseries.h"
22 
23 #include "fopr_Clover.h"
24 #include "fprop_Standard_lex.h"
25 
26 #include "director_Smear.h"
27 #include "fopr_Smeared.h"
28 
29 #include "gammaMatrixSet.h"
30 #include "gaugeFixing.h"
31 #include "projection.h"
32 #include "smear.h"
33 #include "solver.h"
34 #include "source.h"
35 
36 #include "corr2pt_4spinor.h"
37 
38 #include "fieldIO_Binary.h"
39 
40 //====================================================================
42 
57 namespace Test_Spectrum_Clover {
58  const std::string test_name = "Spectrum.Clover.Hadron2ptFunction_withFileIO";
59 
60  //- test-private parameters
61  namespace {
62  const std::string filename_input = "test_Spectrum_Clover_Hadron2ptFunction.yaml";
63  const std::string filename_output = "stdout";
64 
65  class Parameters_Test_Spectrum_Clover : public Parameters {
66  public:
67  Parameters_Test_Spectrum_Clover()
68  {
69  Register_string("gauge_config_status", "NULL");
70  Register_string("gauge_config_type_input", "NULL");
71  Register_string("config_filename_input", "NULL");
72 
73  Register_int("number_of_valence_quarks", 0);
74 
75  Register_string("verbose_level", "NULL");
76 
77  Register_double("expected_result", 0.0);
78  }
79  };
80 
81  class Parameters_Quark : virtual public Parameters {
82  public:
83  Parameters_Quark()
84  {
85  Register_string("temporary_filename_base", "NULL");
86 
87  Register_Parameters("Fopr_Clover", ParametersFactory::New("Fopr.Clover"));
88  Register_Parameters("Source", ParametersFactory::New("Source"));
89  }
90  };
91  }
92 
93  //- prototype declaration
95 
98 
99  string generate_filename(const string&, const int);
100  string generate_filename(const string&, const int, const int);
101 
102 #ifdef USE_TESTMANAGER_AUTOREGISTER
103  namespace {
104 #if defined(USE_GROUP_SU2)
105  // Nc=2 is not available.
106 #else
107  static const bool is_registered = TestManager::RegisterTest(
108  test_name,
110  );
111 #endif
112  }
113 #endif
114 
115  //====================================================================
117  {
118  int result = 0;
119 
120  Timer *timer = new Timer(test_name);
121 
122 
123  // #### Execution main part ####
124  timer->start();
125 
126  result += calculate_quark_propagator();
127  result += calculate_hadron_correlator();
128 
129  timer->report();
130 
131 
132  delete timer;
133 
134  return result;
135  }
136 
137 
138  //====================================================================
139  string generate_filename(const string& base, const int idx)
140  {
141  char buf[1024];
142 
143  sprintf(buf, "%s_%02d.dat", base.c_str(), idx);
144 
145  return string(buf);
146  }
147 
148 
149  //====================================================================
150  string generate_filename(const string& base, const int icolor, const int ispin)
151  {
152  char buf[1024];
153 
154  sprintf(buf, "%s_c%d_s%d.dat", base.c_str(), (icolor + 1), (ispin + 1));
155 
156  return string(buf);
157  }
158 
159 
160  //====================================================================
162  {
163  // #### parameter setup ####
164  int Nc = CommonParameters::Nc();
165  int Nd = CommonParameters::Nd();
166  int Ndim = CommonParameters::Ndim();
167  int Nvol = CommonParameters::Nvol();
168 
169  ParameterManager_YAML params_manager;
170 
171  Parameters *params_test = new Parameters_Test_Spectrum_Clover;
172  Parameters *params_pre = new Parameters;
173 
174  params_pre->Register_Parameters("Test_Spectrum_Clover", params_test);
175 
176  params_manager.read_params(filename_input, params_pre);
177 
178 
179  const int N_quark = params_test->get_int("number_of_valence_quarks");
180  std::vector<Parameters *> params_quark(N_quark);
181 
182  for (int iq = 0; iq < N_quark; ++iq) {
183  params_quark[iq] = new Parameters_Quark;
184  }
185 
186  Parameters *params_gfix = ParametersFactory::New("GaugeFixing");
187  Parameters *params_proj = ParametersFactory::New("Projection");
188  Parameters *params_smear = ParametersFactory::New("Smear");
189  Parameters *params_dr_smear = ParametersFactory::New("Director_Smear");
190  Parameters *params_solver = ParametersFactory::New("Solver");
191  Parameters *params_all = new Parameters;
192 
193 
194  std::stringstream oss;
195 
196  for (int iq = 0; iq < N_quark; ++iq) {
197  oss.str("");
198  oss << "Quark_" << iq + 1;
199  string str = oss.str();
200  params_all->Register_Parameters(str.c_str(), params_quark[iq]);
201  }
202 
203  params_all->Register_Parameters("GaugeFixing", params_gfix);
204  params_all->Register_Parameters("Projection", params_proj);
205  params_all->Register_Parameters("Smear", params_smear);
206  params_all->Register_Parameters("Director_Smear", params_dr_smear);
207  params_all->Register_Parameters("Solver", params_solver);
208 
209  params_manager.read_params(filename_input, params_all);
210 
211  const string str_gconf_status = params_test->get_string("gauge_config_status");
212  const string str_gconf_read = params_test->get_string("gauge_config_type_input");
213  const string readfile = params_test->get_string("config_filename_input");
214  const string str_vlevel = params_test->get_string("verbose_level");
215 
216  const string str_gfix_type = params_gfix->get_string("gauge_fixing_type");
217 
218  std::vector<std::string> savefile_base(N_quark);
219  std::vector<Parameters *> params_clover(N_quark);
220  std::vector<Parameters *> params_source(N_quark);
221 
222  for (int iq = 0; iq < N_quark; ++iq) {
223  savefile_base[iq] = params_quark[iq]->get_string("temporary_filename_base");
224  params_clover[iq] = params_quark[iq]->get_Parameters("Fopr_Clover");
225  params_source[iq] = params_quark[iq]->get_Parameters("Source");
226  }
227 
228  const string str_proj_type = params_proj->get_string("projection_type");
229  const string str_smear_type = params_smear->get_string("smear_type");
230  const string str_solver_type = params_solver->get_string("solver_type");
231 
233 
234  //- print input parameters
235  vout.general(vl, " gconf_status = %s\n", str_gconf_status.c_str());
236  vout.general(vl, " gconf_read = %s\n", str_gconf_read.c_str());
237  vout.general(vl, " readfile = %s\n", readfile.c_str());
238  vout.general(vl, " vlevel = %s\n", str_vlevel.c_str());
239  vout.general(vl, " gfix_type = %s\n", str_gfix_type.c_str());
240  vout.general(vl, " proj_type = %s\n", str_proj_type.c_str());
241  vout.general(vl, " smear_type = %s\n", str_smear_type.c_str());
242  vout.general(vl, " solver_type = %s\n", str_solver_type.c_str());
243 
244  // NB. all str_gmset_type are supposed to be the same.
245  string str_gmset_type = params_clover[0]->get_string("gamma_matrix_type");
246  vout.general(vl, " gmset_type = %s\n", str_gmset_type.c_str());
247 
248  std::vector<std::string> str_source_type(N_quark);
249 
250  for (int iq = 0; iq < N_quark; ++iq) {
251  vout.general(vl, " Quark_%d:\n", iq + 1);
252 
253  str_source_type[iq] = params_source[iq]->get_string("source_type");
254  vout.general(vl, " source_type = %s\n", str_source_type[iq].c_str());
255  }
256  vout.general(vl, "\n");
257 
258  //- input parameter check
259  int err = 0;
260  err += ParameterCheck::non_NULL(str_gconf_status);
261 
262  if (err) {
263  vout.crucial(vl, "%s: Input parameters have not been set.\n", test_name.c_str());
264  abort();
265  }
266 
267 
268  // #### Set up a gauge configuration ####
269  Field_G *U = new Field_G(Nvol, Ndim);
270  GaugeConfig *gconf_read = new GaugeConfig(str_gconf_read);
271 
272  if (str_gconf_status == "Continue") {
273  gconf_read->read_file((Field *)U, readfile);
274  } else if (str_gconf_status == "Cold_start") {
275  U->set_unit();
276  } else if (str_gconf_status == "Hot_start") {
277  RandomNumbers_Mseries rand(1234567);
278  U->set_random(&rand);
279  } else {
280  vout.crucial(vl, "%s: unsupported gconf status \"%s\".\n", test_name.c_str(), str_gconf_status.c_str());
281  abort();
282  }
283 
284  Projection *proj = Projection::New(str_proj_type);
285  Smear *smear = Smear::New(str_smear_type, proj);
286  smear->set_parameters(*params_smear);
287 
288  Director_Smear *dr_smear = new Director_Smear((Smear *)smear);
289  dr_smear->set_parameters(*params_dr_smear);
290  dr_smear->set_config(U);
291 
292  int Nsmear = dr_smear->get_Nsmear();
293  Field_G *Usmear = (Field_G *)dr_smear->getptr_smearedConfig(Nsmear);
294 
295 
296  // #### Gauge fixing ####
297  Staples *staple = new Staples;
298  Field_G *Ufix = new Field_G(Nvol, Ndim);
299 
300  int ndelay = 1000;
301  RandomNumbers *rand = new RandomNumbers_Mseries(ndelay);
302 
303  GaugeFixing *gfix = GaugeFixing::New(str_gfix_type, rand);
304  gfix->set_parameters(*params_gfix);
305 
306  double plaq = staple->plaquette(*Usmear);
307  vout.general(vl, "plaq(original) = %18.14f\n", plaq);
308 
309  gfix->fix(*Ufix, *Usmear);
310 
311  double plaq2 = staple->plaquette(*Ufix);
312  vout.general(vl, "plaq(fixed) = %18.14f\n", plaq2);
313  vout.general(vl, "plaq(diff) = %18.10e\n", plaq - plaq2);
314 
315 
316  // #### object setup #####
317  std::vector<Fopr_Clover *> fopr_c(N_quark);
318  std::vector<Solver *> solver(N_quark);
319  std::vector<Fprop *> fprop_lex(N_quark);
320  std::vector<Source *> source(N_quark);
321 
322  for (int iq = 0; iq < N_quark; ++iq) {
323  fopr_c[iq] = new Fopr_Clover(str_gmset_type);
324  fopr_c[iq]->set_parameters(*params_clover[iq]);
325  fopr_c[iq]->set_config(Ufix);
326 
327  solver[iq] = Solver::New(str_solver_type, fopr_c[iq]);
328  solver[iq]->set_parameters(*params_solver);
329 
330  fprop_lex[iq] = new Fprop_Standard_lex(solver[iq]);
331 
332  source[iq] = Source::New(str_source_type[iq]);
333  source[iq]->set_parameters(*params_source[iq]);
334  }
335  vout.general(vl, "\n");
336 
337  FieldIO *field_io = new FieldIO_Binary(IO_Format::Trivial);
338 
339 
340  // #### Execution main part ####
341  Field_F xq, b;
342  b = 0.0;
343 
344  int Nconv;
345  double diff, diff2;
346 
347  for (int iq = 0; iq < N_quark; ++iq) {
348  vout.general(vl, "Solving quark propagator, flavor = %d:\n", iq + 1);
349  vout.general(vl, " color spin Nconv diff diff2\n");
350 
351  for (int ispin = 0; ispin < Nd; ++ispin) {
352  for (int icolor = 0; icolor < Nc; ++icolor) {
353  int idx = icolor + Nc * ispin;
354  source[iq]->set(b, idx);
355 
356  fprop_lex[iq]->invert_D(xq, b, Nconv, diff);
357 
358  Field_F y(b);
359  fopr_c[iq]->set_mode("D");
360  fopr_c[iq]->mult(y, xq); // y = fopr_c[iq]->mult(xq);
361  axpy(y, -1.0, b); // y -= b;
362  diff2 = y.norm2();
363 
364  vout.general(vl, " %2d %2d %6d %12.4e %12.4e\n",
365  icolor, ispin, Nconv, diff, diff2);
366 
367  // fieldio->write_file(&xq, generate_filename(savefile_base[iq], idx));
368  field_io->write_file(&xq, generate_filename(savefile_base[iq], icolor, ispin));
369  }
370  }
371 
372  vout.general(vl, "\n");
373  }
374 
375 
376  // #### tidy up ####
377  delete gconf_read;
378  delete U;
379  delete Ufix;
380 
381  delete dr_smear;
382 
383  delete rand;
384  delete staple;
385 
386  for (int iq = 0; iq < N_quark; ++iq) {
387  delete fopr_c[iq];
388  delete solver[iq];
389  delete fprop_lex[iq];
390  delete source[iq];
391  }
392 
393  delete field_io;
394 
395  delete gfix;
396  delete proj;
397  delete smear;
398 
399  delete params_pre;
400  delete params_test;
401  delete params_gfix;
402  delete params_proj;
403  delete params_smear;
404  delete params_dr_smear;
405  delete params_solver;
406 
407  for (int iq = 0; iq < N_quark; ++iq) {
408  delete params_clover[iq];
409  delete params_source[iq];
410  delete params_quark[iq];
411  }
412 
413  delete params_all;
414 
415 
416  return EXIT_SUCCESS;
417  }
418 
419 
420  //====================================================================
422  {
423  // #### parameter setup ####
424  int Nc = CommonParameters::Nc();
425  int Nd = CommonParameters::Nd();
426  int Ndim = CommonParameters::Ndim();
427  int Nvol = CommonParameters::Nvol();
428 
429  ParameterManager_YAML params_manager;
430 
431  Parameters *params_test = new Parameters_Test_Spectrum_Clover;
432  Parameters *params_pre = new Parameters;
433 
434  params_pre->Register_Parameters("Test_Spectrum_Clover", params_test);
435 
436  params_manager.read_params(filename_input, params_pre);
437 
438 
439  const int N_quark = params_test->get_int("number_of_valence_quarks");
440  std::vector<Parameters *> params_quark(N_quark);
441 
442  for (int iq = 0; iq < N_quark; ++iq) {
443  params_quark[iq] = new Parameters_Quark;
444  }
445 
446  Parameters *params_all = new Parameters;
447 
448 
449  std::ostringstream oss;
450 
451  for (int iq = 0; iq < N_quark; ++iq) {
452  oss.str("");
453  oss << "Quark_" << iq + 1;
454  string str = oss.str();
455  params_all->Register_Parameters(str.c_str(), params_quark[iq]);
456  }
457 
458  params_manager.read_params(filename_input, params_all);
459 
460  const string str_vlevel = params_test->get_string("verbose_level");
461 
462  const bool do_check = params_test->is_set("expected_result");
463  const double expected_result = do_check ? params_test->get_double("expected_result") : 0.0;
464 
465  std::vector<std::string> savefile_base(N_quark);
466  std::vector<Parameters *> params_clover(N_quark);
467  std::vector<Parameters *> params_source(N_quark);
468 
469  for (int iq = 0; iq < N_quark; ++iq) {
470  savefile_base[iq] = params_quark[iq]->get_string("temporary_filename_base");
471  params_clover[iq] = params_quark[iq]->get_Parameters("Fopr_Clover");
472  params_source[iq] = params_quark[iq]->get_Parameters("Source");
473  }
474 
476 
477  //- print input parameters
478  vout.general(vl, " vlevel = %s\n", str_vlevel.c_str());
479 
480  // NB. all str_gmset_type are supposed to be the same.
481  string str_gmset_type = params_clover[0]->get_string("gamma_matrix_type");
482  vout.general(vl, " gmset_type = %s\n", str_gmset_type.c_str());
483 
484 
485  // #### Set up objects #####
486  GammaMatrixSet *gmset = GammaMatrixSet::New(str_gmset_type);
487 
488  FieldIO *field_io = new FieldIO_Binary(IO_Format::Trivial);
489 
490 
491  // #### Execution main part ####
492  typedef std::valarray<Field_F> PropagatorSet;
493 
494  std::vector<PropagatorSet> sq(N_quark);
495  for (int iq = 0; iq < N_quark; ++iq) {
496  sq[iq].resize(Nc * Nd);
497 
498  for (int i = 0; i < Nc * Nd; ++i) {
499  sq[iq][i] = 0.0;
500  }
501  }
502 
503 
504  for (int iq = 0; iq < N_quark; ++iq) {
505  for (int ispin = 0; ispin < Nd; ++ispin) {
506  for (int icolor = 0; icolor < Nc; ++icolor) {
507  int idx = icolor + Nc * ispin;
508 
509  field_io->read_file(&sq[iq][idx], generate_filename(savefile_base[iq], icolor, ispin));
510  }
511  }
512  }
513 
514 
515  //- meson correlators
516  std::ofstream log_file;
517  if (filename_output != "stdout") {
518  log_file.open(filename_output.c_str());
519  vout.init(log_file);
520  }
521 
522  vout.general(vl, "2-point correlator:\n");
523  Corr2pt_4spinor corr(gmset);
524  valarray<double> result(N_quark);
525 
526  //- case(iq_1 == iq_2)
527  for (int iq = 0; iq < N_quark; ++iq) {
528  vout.general(vl, "Flavor combination = %d, %d\n", iq + 1, iq + 1);
529  result[iq] = corr.meson_all(sq[iq], sq[iq]);
530  vout.general(vl, "\n");
531  }
532 
533 
534  //- case(iq_1 < iq_2)
535  for (int iq = 0; iq < N_quark; ++iq) {
536  for (int jq = iq + 1; jq < N_quark; ++jq) {
537  vout.general(vl, "Flavor combination = %d, %d\n", iq + 1, jq + 1);
538  double result_2 = corr.meson_all(sq[iq], sq[jq]);
539  vout.general(vl, "\n");
540  }
541  }
542 
543  if (filename_output != "stdout") {
544  log_file.close();
545  vout.init(std::cout);
546  }
547 
548 
549  // #### tidy up ####
550  delete params_pre;
551  delete params_test;
552 
553  for (int iq = 0; iq < N_quark; ++iq) {
554  delete params_clover[iq];
555  delete params_source[iq];
556  delete params_quark[iq];
557  }
558 
559  delete params_all;
560 
561  delete gmset;
562 
563  delete field_io;
564 
565 
566  if (do_check) {
567  return Test::verify(expected_result, result[0]);
568  } else {
569  vout.detailed(vl, "check skipped: expected_result not set.\n\n");
570  return EXIT_SKIP;
571  }
572  }
573 } // namespace Test_Spectrum_Clover
#define EXIT_SKIP
Definition: test.h:17
Random number generator base on M-series.
BridgeIO vout
Definition: bridgeIO.cpp:207
void read_params(const std::string &params_file, Parameters *params)
read parameters from file.
void detailed(const char *format,...)
Definition: bridgeIO.cpp:50
double norm2() const
Definition: field.cpp:469
Staple construction.
Definition: staples.h:40
void general(const char *format,...)
Definition: bridgeIO.cpp:38
Container of Field-type object.
Definition: field.h:37
Two-point correlator for Wilson-type fermions.
double plaquette(const Field_G &)
calculates plaquette value.
Definition: staples.cpp:32
virtual void set_parameters(const Parameters &)=0
int get_int(const string &key) const
Definition: parameters.cpp:40
Class for parameters.
Definition: parameters.h:40
static Parameters * New(const std::string &realm)
void set_random(RandomNumbers *rand)
Definition: field_G_imp.cpp:62
Wilson-type fermion field.
Definition: field_F.h:37
void set_unit()
Definition: field_G_imp.cpp:39
static bool RegisterTest(const std::string &key, const Test_function func)
Definition: testManager.h:79
SU(N) gauge field.
Definition: field_G.h:36
Field * getptr_smearedConfig(int i_smear)
get pointer to i-th smeared config (0th is original thin link)
bool is_set(const string &) const
Definition: parameters.cpp:366
double get_double(const string &key) const
Definition: parameters.cpp:25
string generate_filename(const string &, const int)
Set of Gamma Matrices: basis class.
void init(std::ostream &os)
Definition: bridgeIO.h:43
int non_NULL(const std::string v)
Definition: checker.cpp:61
void start()
Definition: timer.cpp:44
void axpy(Field &y, const double a, const Field &x)
axpy(y, a, x): y := a * x + y
Definition: field.cpp:193
Get quark propagator for Fopr with lexical site index.
void set_config(Field *U)
set pointer to original thin link variable
int get_Nsmear()
get number of applied smearing operation
void crucial(const char *format,...)
Definition: bridgeIO.cpp:26
double meson_all(const std::valarray< Field_F > &sq1, const std::valarray< Field_F > &sq2)
void Register_Parameters(const string &, Parameters *const)
Definition: parameters.cpp:359
base class for projection operator into gauge group.
Definition: projection.h:33
const Format * Trivial
Definition: io_format.cpp:27
Manager of smeared configurations.
FieldIO_Binary class for file I/O of Field data in binary format.
Base class of random number generators.
Definition: randomNumbers.h:40
Bridge::VerboseLevel vl
Definition: checker.cpp:18
VerboseLevel
Definition: bridgeIO.h:25
virtual void read_file(Field *v, std::string)=0
read data from file.
virtual void write_file(Field *v, std::string)=0
write data to file.
void set_parameters(const Parameters &params)
set paramters, must be called before set_config
base class for smearing of link variables.
Definition: smear.h:36
Parameter manager with YAML parser.
gauge fixing.
Definition: gaugeFixing.h:34
GaugeConfig class for file I/O of gauge configuration.
Definition: gaugeConfig.h:56
FieldIO class for file I/O of space-time distributed data.
Definition: fieldIO.h:48
Definition: timer.h:31
virtual void fix(Field_G &Ufix, const Field_G &Uorg)=0
int verify(const double expected, const double result)
Definition: test.cpp:27
void read_file(Field *u, const string &filename)
Definition: gaugeConfig.cpp:85
string get_string(const string &key) const
Definition: parameters.cpp:85
void report(const Bridge::VerboseLevel vl=Bridge::GENERAL)
Definition: timer.cpp:128
static VerboseLevel set_verbose_level(const std::string &str)
Definition: bridgeIO.cpp:191
virtual void set_parameters(const Parameters &params)=0